Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose 3,5-epimerase | F3W81_12395 | P26394 | Negative | 2643043 - 2643606 | 20677.0 |
| l,d-transpeptidase family protein | F3W81_12400 | P39176 | Positive | 2644022 - 2644594 | 20285.5 |
| thioredoxin trxc | F3W81_12405 | P0AGG6 | Negative | 2644627 - 2645058 | 15444.7 |
| alpha/beta fold hydrolase | F3W81_12410 | Not Available | Positive | 2645191 - 2646096 | 33405.1 |
| geranylgeranyl reductase family protein | F3W81_12415 | P96800 | Positive | 2646126 - 2647304 | 42038.8 |
| cold-shock protein | F3W81_12420 | P55390 | Positive | 2647517 - 2647723 | 7518.89 |
| arylesterase | F3W81_12425 | Q9HZY8 | Negative | 2647773 - 2648405 | 21507.6 |
| atp-binding cassette domain-containing protein | F3W81_12430 | P0A9T9 | Positive | 2648479 - 2649165 | 24246.2 |
| ftsx-like permease family protein | F3W81_12435 | P77504 | Positive | 2649105 - 2651696 | 90324.1 |
| aminomethyl-transferring glycine dehydrogenase | F3W81_12440 | Q16AX0 | Negative | 2651934 - 2654786 | 102668.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
