Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | F3W81_12345 | B0R6I5 | Positive | 2632919 - 2634172 | 43144.8 |
| Trna-arg | Not Available | Not Available | Positive | 2634942 - 2635018 | Not Available |
| atp-binding cassette domain-containing protein | F3W81_12355 | P24586 | Negative | 2636148 - 2636810 | 23315.2 |
| capsule biosynthesis protein | F3W81_12360 | P32014 | Negative | 2636820 - 2637941 | 41204.3 |
| sugar abc transporter permease | F3W81_12365 | P24584 | Positive | 2638204 - 2639010 | 29616.3 |
| hypothetical protein | F3W81_12370 | Not Available | Negative | 2639133 - 2639243 | 3682.19 |
| hypothetical protein | F3W81_12375 | Not Available | Negative | 2639553 - 2640197 | 22169.7 |
| glucose-1-phosphate thymidylyltransferase rfba | F3W81_12380 | B0RVK9 | Negative | 2640292 - 2641167 | 31787.9 |
| dtdp-4-dehydrorhamnose reductase | F3W81_12385 | P55463 | Negative | 2641164 - 2642012 | 29655.2 |
| dtdp-glucose 4,6-dehydratase | F3W81_12390 | P27830 | Negative | 2642009 - 2643046 | 37704.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
