Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | F3W81_12245 | Q9YGA6 | Negative | 2611781 - 2612878 | 39950.2 |
| abc transporter permease subunit | F3W81_12250 | P55603 | Negative | 2613055 - 2613990 | 34309.4 |
| abc transporter permease subunit | F3W81_12255 | O34706 | Negative | 2613987 - 2614934 | 35798.2 |
| extracellular solute-binding protein | F3W81_12260 | Q7LYW7 | Negative | 2615008 - 2616333 | 48792.6 |
| substrate-binding domain-containing protein | F3W81_12265 | P37947 | Negative | 2616502 - 2617560 | 37842.1 |
| alpha-hydroxy-acid oxidizing protein | F3W81_12270 | B7RR92 | Positive | 2617809 - 2618822 | 35756.7 |
| trap transporter small permease subunit | F3W81_12275 | Not Available | Positive | 2618967 - 2619551 | 21580.0 |
| trap transporter large permease subunit | F3W81_12280 | Q9KQS1 | Positive | 2619551 - 2620942 | 48543.7 |
| abc transporter substrate-binding protein | F3W81_12285 | Q3J1R2 | Negative | 2621019 - 2622104 | 39380.6 |
| cold-shock protein | F3W81_12290 | P55390 | Positive | 2622623 - 2622829 | 7159.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
