Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy-dependent translational throttle protein etta | F3W81_12145 | A0A0H2VFI8 | Negative | 2584371 - 2586026 | 61600.4 |
| ai-2e family transporter | F3W81_12150 | O51039 | Positive | 2586455 - 2587774 | 47009.7 |
| nicotinate-nucleotide adenylyltransferase | F3W81_12155 | Q16AV3 | Positive | 2587825 - 2588538 | 26843.3 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | F3W81_12160 | P39844 | Positive | 2588613 - 2590136 | 55024.0 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | F3W81_12165 | Not Available | Negative | 2590160 - 2590585 | 15841.9 |
| lysine--trna ligase | F3W81_12170 | Q16AV0 | Positive | 2590744 - 2592339 | 60819.0 |
| duf4864 domain-containing protein | F3W81_12175 | Not Available | Positive | 2592459 - 2592887 | 15577.8 |
| hypothetical protein | F3W81_12180 | Not Available | Negative | 2592897 - 2593601 | 25471.6 |
| response regulator | F3W81_12185 | P0CAW8 | Negative | 2593759 - 2594460 | 25941.6 |
| hypothetical protein | F3W81_12190 | Not Available | Positive | 2594780 - 2595073 | 11382.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
