Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | F3W81_12095 | O80472 | Positive | 2575239 - 2575955 | 25861.9 |
| adenylosuccinate lyase family protein | F3W81_12100 | Q9I6Q8 | Positive | 2575955 - 2577283 | 46187.5 |
| mfs transporter | F3W81_12105 | P02982 | Positive | 2577361 - 2578572 | 42625.8 |
| zinc-binding dehydrogenase | F3W81_12110 | P80094 | Positive | 2578663 - 2579748 | 37460.5 |
| mandelate racemase/muconate lactonizing enzyme family protein | F3W81_12115 | Q8XVS8 | Positive | 2579745 - 2580968 | 43751.3 |
| metalloregulator arsr/smtb family transcription factor | F3W81_12120 | Q8UAA8 | Positive | 2581083 - 2581385 | 10792.0 |
| hypothetical protein | F3W81_12125 | Not Available | Negative | 2581382 - 2582386 | 35088.1 |
| hypothetical protein | F3W81_12130 | Not Available | Positive | 2582691 - 2583050 | 13903.7 |
| cold-shock protein | F3W81_12135 | P55390 | Negative | 2583128 - 2583334 | 7297.65 |
| duf4168 domain-containing protein | F3W81_12140 | Not Available | Positive | 2583806 - 2584228 | 14747.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
