Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bcr/cfla family efflux mfs transporter | F3W81_11945 | P28246 | Positive | 2546956 - 2548164 | 42486.2 |
| imma/irre family metallo-endopeptidase | F3W81_11950 | Q3J4E6 | Positive | 2548256 - 2549656 | 51845.1 |
| hlyd family efflux transporter periplasmic adaptor subunit | F3W81_11955 | P0DPR6 | Negative | 2549660 - 2550778 | 39292.6 |
| mfs transporter | F3W81_11960 | Q9RQ29 | Negative | 2550792 - 2552480 | 59541.1 |
| marr family transcriptional regulator | F3W81_11965 | P0A4U5 | Negative | 2552477 - 2552920 | 16411.7 |
| eama family transporter | F3W81_11970 | Q9KKU0 | Negative | 2553075 - 2553980 | 32385.3 |
| amino acid transporter | F3W81_11975 | P64904 | Negative | 2554027 - 2554629 | 20786.9 |
| hypothetical protein | F3W81_11980 | Not Available | Negative | 2554661 - 2555527 | 33726.6 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | F3W81_11985 | Q1GK98 | Positive | 2555660 - 2556982 | 49265.2 |
| hypothetical protein | F3W81_11990 | Not Available | Positive | 2557197 - 2557529 | 12207.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
