Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 2 | F3W81_11845 | P44469 | Positive | 2523069 - 2525012 | 70890.9 |
| rod shape-determining protein roda | F3W81_11850 | P44468 | Positive | 2525009 - 2526148 | 41471.9 |
| glyoxylate/hydroxypyruvate reductase a | F3W81_11855 | A1JRR3 | Positive | 2526239 - 2527168 | 33742.4 |
| duf2937 family protein | F3W81_11860 | Not Available | Negative | 2527185 - 2527874 | 24556.8 |
| proline--trna ligase | F3W81_11865 | Q168E6 | Negative | 2528106 - 2529443 | 50369.1 |
| ai-2e family transporter | F3W81_11870 | Q9ZCT3 | Positive | 2529617 - 2530702 | 38805.5 |
| chromosomal replication initiator dnaa | F3W81_11875 | B0T135 | Positive | 2530707 - 2531405 | 25012.2 |
| rna degradosome polyphosphate kinase | F3W81_11880 | Q2IX63 | Positive | 2531487 - 2533667 | 81477.7 |
| exopolyphosphatase | F3W81_11885 | Q9X8H1 | Positive | 2533722 - 2535275 | 57600.5 |
| hypothetical protein | F3W81_11890 | Not Available | Negative | 2535279 - 2535638 | 12927.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
