Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent oxidoreductase | F3W81_11795 | P46072 | Negative | 2512742 - 2513371 | 23436.8 |
| (d)cmp kinase | F3W81_11800 | A8LSF1 | Negative | 2513563 - 2514171 | 21433.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | F3W81_11805 | Q1GK84 | Negative | 2514251 - 2515594 | 46514.9 |
| sdr family nad(p)-dependent oxidoreductase | F3W81_11810 | Q9RBP5 | Negative | 2515680 - 2516345 | 22677.3 |
| 2-isopropylmalate synthase | F3W81_11815 | Q9A823 | Positive | 2516685 - 2518271 | 57176.3 |
| duf808 family protein | F3W81_11820 | P46125 | Negative | 2518357 - 2519325 | 33770.0 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | F3W81_11825 | P37634 | Negative | 2519462 - 2520241 | 29133.1 |
| mreb/mrl family cell shape determining protein | F3W81_11830 | A0A0H3C7V4 | Positive | 2520416 - 2521462 | 37043.1 |
| rod shape-determining protein mrec | F3W81_11835 | Q70AN6 | Positive | 2521563 - 2522531 | 35198.2 |
| rod shape-determining protein mred | F3W81_11840 | Not Available | Positive | 2522524 - 2523072 | 20355.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
