Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25/general stress protein ctc | F3W81_11745 | Q1GK67 | Positive | 2504233 - 2504856 | 22156.7 |
| aminoacyl-trna hydrolase | F3W81_11750 | Q1GK69 | Positive | 2505001 - 2505708 | 25644.7 |
| duf2332 family protein | F3W81_11755 | Not Available | Positive | 2505705 - 2506727 | 36934.9 |
| duf2237 family protein | F3W81_11760 | Not Available | Positive | 2506854 - 2507240 | 13934.5 |
| tryptophan synthase subunit beta | F3W81_11765 | Q1GK77 | Negative | 2507300 - 2508538 | 45046.1 |
| duf3291 domain-containing protein | F3W81_11770 | Not Available | Negative | 2508636 - 2508983 | 12836.7 |
| phosphoribosylanthranilate isomerase | F3W81_11775 | Q28LA8 | Negative | 2509051 - 2509725 | 23371.3 |
| duf1049 domain-containing protein | F3W81_11780 | Not Available | Negative | 2509747 - 2510088 | 12805.0 |
| integration host factor subunit beta | F3W81_11785 | Q161H6 | Negative | 2510090 - 2510371 | 10806.9 |
| 30s ribosomal protein s1 | F3W81_11790 | Q6NDP1 | Negative | 2510709 - 2512391 | 61344.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
