Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | F3W81_11695 | D1BZ82 | Negative | 2490968 - 2492059 | 39132.8 |
| nucleotide sugar dehydrogenase | F3W81_11700 | G3XD94 | Positive | 2492314 - 2493657 | 48015.7 |
| metallophosphoesterase | F3W81_11705 | Not Available | Positive | 2493608 - 2495362 | 62987.0 |
| Trna-ser | Not Available | Not Available | Positive | 2495560 - 2495649 | Not Available |
| duf1236 domain-containing protein | F3W81_11715 | Not Available | Positive | 2496123 - 2496773 | 22261.3 |
| redox-regulated atpase ychf | F3W81_11720 | P0ABU3 | Negative | 2496858 - 2497955 | 39233.6 |
| tryptophan synthase subunit alpha | F3W81_11725 | Q28LB1 | Positive | 2498317 - 2499108 | 27399.0 |
| lytic murein transglycosylase | F3W81_11730 | P41052 | Positive | 2499255 - 2500400 | 40383.2 |
| l-lactate dehydrogenase | F3W81_11735 | A8HTC9 | Positive | 2500475 - 2501641 | 43030.1 |
| pas domain s-box protein | F3W81_11740 | Q9I3S1 | Positive | 2501786 - 2503867 | 76144.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
