Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abrb family transcriptional regulator | F3W81_11595 | P75747 | Positive | 2465381 - 2466460 | 37841.2 |
| tonb-dependent receptor | F3W81_11600 | Q6CZB5 | Positive | 2466864 - 2468720 | 66392.7 |
| abc transporter substrate-binding protein | F3W81_11605 | O34805 | Positive | 2468720 - 2469529 | 28726.6 |
| iron chelate uptake abc transporter family permease subunit | F3W81_11610 | P15029 | Positive | 2469526 - 2470509 | 33202.4 |
| atp-binding cassette domain-containing protein | F3W81_11615 | B0R5G4 | Positive | 2470506 - 2471243 | 26032.6 |
| ribosome small subunit-dependent gtpase a | F3W81_11620 | Q98JM4 | Positive | 2471394 - 2472401 | 35951.8 |
| fkbm family methyltransferase | F3W81_11625 | Q1D6W9 | Negative | 2472409 - 2473119 | 25942.8 |
| eal domain-containing protein | F3W81_11630 | P55552 | Negative | 2473307 - 2475247 | 72567.0 |
| oxidoreductase | F3W81_11635 | Not Available | Negative | 2475256 - 2475762 | 18323.0 |
| cyclic nucleotide-binding domain-containing protein | F3W81_11640 | O59922 | Negative | 2476128 - 2476568 | 16304.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
