Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylmalonate decarboxylase | F3W81_11545 | Q88FY4 | Positive | 2456985 - 2457731 | 27342.8 |
| polysaccharide deacetylase | F3W81_11550 | O13842 | Positive | 2457793 - 2458704 | 34617.8 |
| fcd domain-containing protein | F3W81_11555 | Q8GAL4 | Positive | 2458725 - 2459480 | 27918.1 |
| sdr family nad(p)-dependent oxidoreductase | F3W81_11560 | P73574 | Positive | 2459477 - 2460301 | 28521.1 |
| mbl fold metallo-hydrolase | F3W81_11565 | O34760 | Positive | 2460301 - 2461197 | 32873.9 |
| gntr family transcriptional regulator | F3W81_11570 | O31459 | Negative | 2461188 - 2461958 | 28771.2 |
| decarboxylase | F3W81_11575 | Q9WX57 | Positive | 2462164 - 2462943 | 26639.9 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | F3W81_11580 | Q0QLE4 | Positive | 2462959 - 2463822 | 31052.1 |
| isochorismatase family protein | F3W81_11585 | Q88FY5 | Positive | 2463860 - 2464507 | 22719.8 |
| sdr family oxidoreductase | F3W81_11590 | Q53882 | Positive | 2464526 - 2465269 | 25691.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
