Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | F3W81_00670 | Not Available | Negative | 148524 - 149399 | 31246.3 |
| hypothetical protein | F3W81_00675 | Not Available | Negative | 149422 - 149637 | 7274.3 |
| pseudouridine synthase | F3W81_00680 | Q4UL59 | Negative | 149866 - 151392 | 52644.5 |
| nucleoside deaminase | F3W81_00685 | A9CK16 | Positive | 151472 - 151921 | 15835.1 |
| ribose-phosphate diphosphokinase | F3W81_00690 | B9KPJ0 | Negative | 152170 - 153186 | 37263.4 |
| 2-hydroxychromene-2-carboxylate isomerase | F3W81_00695 | Q9X9Q7 | Positive | 153293 - 153895 | 21581.7 |
| alpha/beta fold hydrolase | F3W81_00700 | L0TC47 | Positive | 153895 - 154740 | 30482.2 |
| low specificity l-threonine aldolase | F3W81_00705 | O50584 | Negative | 154764 - 155807 | 37754.1 |
| ycgn family cysteine cluster protein | F3W81_00710 | O68068 | Negative | 155807 - 156289 | 18442.8 |
| bifunctional riboflavin kinase/fad synthetase | F3W81_00715 | Q8Y7F2 | Negative | 156286 - 157224 | 33824.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
