Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | F3W81_11345 | P33950 | Positive | 2409399 - 2410952 | 57705.1 |
| metallophosphoesterase-domain-containing protein | F3W81_11350 | Not Available | Positive | 2411022 - 2411864 | 30903.3 |
| dipeptide abc transporter atp-binding protein | F3W81_11355 | Q323W5 | Positive | 2411861 - 2413525 | 59742.9 |
| dha2 family efflux mfs transporter permease subunit | F3W81_11360 | P0AEJ1 | Negative | 2413544 - 2415088 | 54972.0 |
| hlyd family efflux transporter periplasmic adaptor subunit | F3W81_11365 | P44928 | Negative | 2415085 - 2416173 | 38041.1 |
| marr family transcriptional regulator | F3W81_11370 | P67748 | Negative | 2416170 - 2416613 | 16492.1 |
| llm class flavin-dependent oxidoreductase | F3W81_11375 | P39606 | Negative | 2416870 - 2417892 | 36972.5 |
| hypothetical protein | F3W81_11380 | Not Available | Negative | 2420453 - 2420563 | 2914.23 |
| hypothetical protein | F3W81_11385 | O08455 | Negative | 2420809 - 2421426 | 22438.6 |
| dna repair exonuclease | F3W81_11390 | O07522 | Negative | 2421423 - 2422613 | 41631.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
