Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fcd domain-containing protein | F3W81_11295 | O07007 | Positive | 2399471 - 2400214 | 27053.2 |
| 5-dehydro-4-deoxyglucarate dehydratase | F3W81_11300 | A3PQ70 | Positive | 2400299 - 2401204 | 31986.4 |
| mandelate racemase/muconate lactonizing enzyme family protein | F3W81_11305 | A9CEQ8 | Positive | 2401209 - 2402345 | 41949.5 |
| amidohydrolase family protein | F3W81_11310 | A9CEQ7 | Positive | 2402345 - 2403208 | 30728.5 |
| hypothetical protein | F3W81_11315 | Not Available | Negative | 2403476 - 2404294 | 29928.7 |
| amidohydrolase family protein | F3W81_11320 | P25524 | Negative | 2404374 - 2405582 | 41951.2 |
| lysr family transcriptional regulator | F3W81_11325 | P25545 | Negative | 2405741 - 2406625 | 31739.1 |
| had-ia family hydrolase | F3W81_11330 | O33194 | Positive | 2406796 - 2407524 | 25521.9 |
| abc transporter permease subunit | F3W81_11335 | A1A970 | Positive | 2407521 - 2408447 | 33320.6 |
| abc transporter permease subunit | F3W81_11340 | A0A0H2ZFV0 | Positive | 2408463 - 2409335 | 30894.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
