Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fcd domain-containing protein | F3W81_11245 | P0ACM2 | Negative | 2389752 - 2390462 | 25949.9 |
| atp-binding cassette domain-containing protein | F3W81_11250 | A1UG51 | Positive | 2390757 - 2391731 | 35474.7 |
| extracellular solute-binding protein | F3W81_11255 | P0AFK9 | Positive | 2391788 - 2393053 | 46486.2 |
| abc transporter permease subunit | F3W81_11260 | P0AFK4 | Positive | 2393203 - 2394099 | 33413.8 |
| abc transporter permease subunit | F3W81_11265 | P0AFR9 | Positive | 2394101 - 2394937 | 30496.8 |
| hyue hydantoin racemase | F3W81_11270 | Q6TMG4 | Positive | 2394943 - 2395590 | 21325.0 |
| nad-dependent epimerase/dehydratase family protein | F3W81_11275 | Q7CRQ0 | Negative | 2395594 - 2396385 | 28978.6 |
| trap transporter large permease subunit | F3W81_11280 | P40800 | Negative | 2396405 - 2397682 | 44138.5 |
| trap transporter small permease subunit | F3W81_11285 | Q9KR65 | Negative | 2397683 - 2398204 | 18784.6 |
| dctp family trap transporter solute-binding subunit | F3W81_11290 | Q1QUN2 | Negative | 2398365 - 2399339 | 35534.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
