Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyamine abc transporter atp-binding protein | F3W81_11095 | Q1AS06 | Negative | 2360227 - 2361279 | 37967.5 |
| abc transporter permease subunit | F3W81_11100 | P0AFK8 | Negative | 2361276 - 2362064 | 27928.2 |
| abc transporter permease subunit | F3W81_11105 | P45170 | Negative | 2362057 - 2362878 | 29990.4 |
| extracellular solute-binding protein | F3W81_11110 | P0A2C8 | Negative | 2362966 - 2364003 | 37821.4 |
| gntr family transcriptional regulator | F3W81_11115 | Not Available | Positive | 2364200 - 2365147 | 35453.6 |
| glycosyl transferase family 1 | F3W81_11120 | Q53685 | Positive | 2365144 - 2366412 | 46111.1 |
| response regulator | F3W81_11125 | Q4ZSY3 | Positive | 2366714 - 2368618 | 68957.0 |
| response regulator | F3W81_11130 | Q9I4N3 | Negative | 2368696 - 2369322 | 22543.2 |
| ornithine cyclodeaminase | F3W81_11135 | P09773 | Negative | 2369279 - 2370331 | 37975.4 |
| arginase | F3W81_11140 | P14012 | Negative | 2370343 - 2371269 | 33299.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
