Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acrb/acrd/acrf family protein | F3W81_11045 | P25197 | Positive | 2348248 - 2351382 | 111900.0 |
| nad(p)-binding protein | F3W81_11050 | A0A0H3LKL4 | Positive | 2351522 - 2352649 | 40809.5 |
| helix-turn-helix domain-containing protein | F3W81_11055 | P77300 | Positive | 2352603 - 2353655 | 37692.6 |
| helix-turn-helix domain-containing protein | F3W81_11060 | Q52154 | Negative | 2353656 - 2354435 | 27850.5 |
| cupin domain-containing protein | F3W81_11065 | Not Available | Positive | 2354580 - 2355527 | 34883.4 |
| chap domain-containing protein | F3W81_11070 | Not Available | Negative | 2355815 - 2356366 | 20202.3 |
| aldehyde dehydrogenase family protein | F3W81_11075 | A6W2P7 | Negative | 2356713 - 2358197 | 52640.9 |
| duf861 domain-containing protein | F3W81_11080 | Not Available | Negative | 2358194 - 2358538 | 12805.3 |
| duf861 domain-containing protein | F3W81_11085 | Not Available | Negative | 2358544 - 2358900 | 13036.2 |
| glycosyl transferase family 1 | F3W81_11090 | O34539 | Negative | 2358897 - 2360174 | 47504.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
