Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | F3W81_10995 | Not Available | Negative | 2334578 - 2335048 | 16845.8 |
| wecb/taga/cpsf family glycosyltransferase | F3W81_11000 | Q04664 | Negative | 2335208 - 2336620 | 50637.8 |
| response regulator | F3W81_11005 | P29369 | Positive | 2336972 - 2337586 | 22340.8 |
| hypothetical protein | F3W81_11010 | Not Available | Positive | 2337696 - 2339180 | 52974.3 |
| o-antigen ligase domain-containing protein | F3W81_11015 | Not Available | Positive | 2339189 - 2340499 | 48042.8 |
| tetr family transcriptional regulator | F3W81_11020 | O07001 | Negative | 2340504 - 2341190 | 24454.9 |
| acrb/acrd/acrf family protein | F3W81_11025 | D0ZEW1 | Negative | 2341187 - 2344276 | 111903.0 |
| efflux rnd transporter periplasmic adaptor subunit | F3W81_11030 | P25196 | Negative | 2344273 - 2345334 | 36877.6 |
| efflux rnd transporter periplasmic adaptor subunit | F3W81_11035 | C9XVZ5 | Negative | 2345331 - 2346407 | 37138.5 |
| hypothetical protein | F3W81_11040 | Not Available | Positive | 2346727 - 2348244 | 52981.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
