Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | F3W81_00620 | P9WL96 | Positive | 137299 - 138246 | 35529.3 |
| transglutaminase family protein | F3W81_00625 | Q49757 | Positive | 138253 - 139056 | 29255.6 |
| peptidase | F3W81_00630 | Not Available | Positive | 139111 - 139875 | 27959.3 |
| urea abc transporter substrate-binding protein | F3W81_00635 | P27017 | Positive | 140341 - 141621 | 46015.3 |
| urea abc transporter permease subunit urtb | F3W81_00640 | P21627 | Positive | 141799 - 143766 | 69933.5 |
| urea abc transporter permease subunit urtc | F3W81_00645 | P30296 | Positive | 144023 - 145252 | 43780.0 |
| urea abc transporter atp-binding protein urtd | F3W81_00650 | P0A194 | Positive | 145252 - 145992 | 27164.0 |
| urea abc transporter atp-binding subunit urte | F3W81_00655 | P21630 | Positive | 145996 - 146691 | 25396.9 |
| d-tyrosyl-trna(tyr) deacylase | F3W81_00660 | Q5LP58 | Negative | 146841 - 147278 | 15168.3 |
| toxic anion resistance protein | F3W81_00665 | Q6G9F5 | Negative | 147300 - 148517 | 44937.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
