Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron chelate uptake abc transporter family permease subunit | F3W81_10795 | P37738 | Negative | 2281123 - 2282046 | 31369.6 |
| abc transporter substrate-binding protein | F3W81_10800 | P94421 | Negative | 2282076 - 2283014 | 32126.7 |
| pas domain s-box protein | F3W81_10805 | O87939 | Negative | 2283146 - 2283796 | 24445.3 |
| abc transporter substrate-binding protein | F3W81_10810 | Q2YKQ9 | Positive | 2283878 - 2285080 | 43313.7 |
| atp-binding cassette domain-containing protein | F3W81_10815 | P0A9S8 | Positive | 2285141 - 2285905 | 27495.5 |
| atp-binding cassette domain-containing protein | F3W81_10820 | P21630 | Positive | 2285902 - 2286606 | 24958.4 |
| branched-chain amino acid abc transporter permease | F3W81_10825 | P0AEX8 | Positive | 2286617 - 2287615 | 34997.8 |
| branched-chain amino acid abc transporter permease | F3W81_10830 | P30296 | Positive | 2287624 - 2288697 | 38053.1 |
| alpha/beta fold hydrolase | F3W81_10835 | I6YGS0 | Positive | 2288694 - 2289539 | 30835.1 |
| lrp/asnc family transcriptional regulator | F3W81_10840 | Q9V0Y9 | Negative | 2289536 - 2289775 | 8776.42 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
