Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | F3W81_10695 | P54721 | Positive | 2258830 - 2259321 | 17836.0 |
| branched-chain amino acid aminotransferase | F3W81_10700 | Q4ULR3 | Positive | 2259577 - 2260443 | 31187.3 |
| gnat family n-acetyltransferase | F3W81_10705 | P40586 | Negative | 2260440 - 2261156 | 26628.3 |
| hemerythrin domain-containing protein | F3W81_10710 | Q8YS92 | Positive | 2261422 - 2261898 | 18517.3 |
| pas domain s-box protein | F3W81_10715 | Q9I3S1 | Positive | 2262288 - 2263586 | 46198.9 |
| aspartate--trna ligase | F3W81_10720 | Q1GIZ8 | Negative | 2263908 - 2265689 | 66749.7 |
| methyltransferase domain-containing protein | F3W81_10725 | P31049 | Positive | 2266123 - 2267358 | 46371.7 |
| carbamoyl-phosphate synthase large subunit | F3W81_10730 | Q92PZ4 | Positive | 2267672 - 2270959 | 118488.0 |
| thymidine kinase | F3W81_10735 | Q5LUY8 | Positive | 2271217 - 2271807 | 21664.7 |
| d-glycerate dehydrogenase | F3W81_10740 | B6YWH0 | Negative | 2271937 - 2272893 | 34362.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
