Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yifb family mg chelatase-like aaa atpase | F3W81_10645 | P45049 | Positive | 2245684 - 2247192 | 53253.4 |
| glutathione synthase | F3W81_10650 | Q92SN3 | Negative | 2247189 - 2248124 | 34900.0 |
| hypothetical protein | F3W81_10655 | A8LJ68 | Negative | 2248194 - 2248598 | 14465.4 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | F3W81_10660 | Q98DM9 | Negative | 2248595 - 2249458 | 30573.8 |
| abc transporter substrate-binding protein | F3W81_10665 | Not Available | Positive | 2249563 - 2250810 | 42132.5 |
| [protein-pii] uridylyltransferase | F3W81_10670 | Q5LWE5 | Positive | 2250842 - 2253601 | 104693.0 |
| murein biosynthesis integral membrane protein murj | F3W81_10675 | O05467 | Positive | 2253598 - 2255157 | 55934.9 |
| phospholipase | F3W81_10680 | P70496 | Positive | 2255239 - 2256762 | 57601.5 |
| rhomboid family intramembrane serine protease | F3W81_10685 | Not Available | Negative | 2256770 - 2257465 | 24934.2 |
| tryptophan--trna ligase | F3W81_10690 | P67586 | Positive | 2257630 - 2258685 | 38575.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
