Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | F3W81_10545 | A3PMF8 | Positive | 2224221 - 2225423 | 42901.3 |
| hypothetical protein | F3W81_10550 | Not Available | Positive | 2225456 - 2225857 | 15156.0 |
| mate family efflux transporter | F3W81_10555 | Q92PZ0 | Negative | 2225854 - 2227266 | 49616.3 |
| duf2461 family protein | F3W81_10560 | Not Available | Positive | 2227507 - 2228172 | 24926.8 |
| dna topoisomerase iv subunit b | F3W81_10565 | O54479 | Positive | 2228338 - 2230296 | 71671.7 |
| atp-binding cassette domain-containing protein | F3W81_10570 | Q168E3 | Negative | 2230336 - 2231034 | 24784.7 |
| lipoprotein-releasing abc transporter permease subunit | F3W81_10575 | P57061 | Negative | 2231027 - 2232274 | 44426.2 |
| sseb family protein | F3W81_10580 | Not Available | Negative | 2232416 - 2233225 | 28557.4 |
| uracil-dna glycosylase family protein | F3W81_10585 | O86222 | Negative | 2233213 - 2233806 | 22307.9 |
| sodium:proton antiporter | F3W81_10590 | Q28L40 | Positive | 2233963 - 2235210 | 45136.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
