Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | F3W81_10495 | Not Available | Negative | 2217363 - 2217644 | 9856.75 |
| duf2177 family protein | F3W81_10500 | Not Available | Negative | 2217802 - 2218212 | 14744.3 |
| restriction endonuclease | F3W81_10505 | Not Available | Negative | 2218484 - 2219536 | 39357.1 |
| fad-dependent thymidylate synthase | F3W81_10510 | Q5LTY7 | Negative | 2219590 - 2220498 | 34724.3 |
| lactoylglutathione lyase | F3W81_10515 | Q9KT93 | Positive | 2220735 - 2221163 | 16166.2 |
| duf1194 domain-containing protein | F3W81_10520 | Not Available | Positive | 2221259 - 2221975 | 25127.9 |
| duf1194 domain-containing protein | F3W81_10525 | Not Available | Positive | 2221963 - 2222703 | 26452.1 |
| winged helix dna-binding protein | F3W81_10530 | P96440 | Negative | 2222797 - 2223297 | 19295.3 |
| succinate dehydrogenase assembly factor 2 | F3W81_10535 | A5DJ67 | Negative | 2223469 - 2223735 | 10007.9 |
| helix-turn-helix domain-containing protein | F3W81_10540 | P06966 | Negative | 2223732 - 2224127 | 14357.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
