Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine--trna ligase | F3W81_10445 | Q1GFW2 | Positive | 2210568 - 2212514 | 73527.1 |
| eama family transporter | F3W81_10450 | P29939 | Negative | 2212568 - 2213002 | 15133.0 |
| duf1109 family protein | F3W81_10455 | A0A0H3CC47 | Negative | 2213104 - 2213745 | 22241.1 |
| sigd protein | F3W81_10460 | A0A0H3CCX2 | Negative | 2213766 - 2214152 | 13903.6 |
| duf692 family protein | F3W81_10465 | B9JEP8 | Positive | 2214158 - 2214862 | 25582.4 |
| duf2063 domain-containing protein | F3W81_10470 | Not Available | Positive | 2214859 - 2215617 | 26664.1 |
| doxx family membrane protein | F3W81_10475 | Not Available | Positive | 2215614 - 2216195 | 21073.9 |
| hypothetical protein | F3W81_10480 | Not Available | Negative | 2216128 - 2216496 | 12509.6 |
| arsenate reductase | F3W81_10485 | P44515 | Negative | 2216524 - 2216838 | 11891.4 |
| cold-shock protein | F3W81_10490 | P55390 | Positive | 2217032 - 2217238 | 7402.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
