Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crossover junction endodeoxyribonuclease ruvc | F3W81_10395 | A3PLU5 | Negative | 2200655 - 2201152 | 17188.1 |
| duf1127 domain-containing protein | F3W81_10400 | Not Available | Positive | 2201510 - 2201704 | 6948.13 |
| methyltransferase | F3W81_10405 | Q89FW1 | Negative | 2201851 - 2202723 | 30675.7 |
| primosomal protein n' | F3W81_10410 | P05445 | Negative | 2202838 - 2205036 | 79257.8 |
| fructose-6-phosphate aldolase | F3W81_10415 | Q1GE05 | Positive | 2205131 - 2205784 | 23128.2 |
| duf484 family protein | F3W81_10420 | Not Available | Positive | 2205922 - 2206641 | 26539.7 |
| tyrosine-type recombinase/integrase | F3W81_10425 | B8I9N8 | Positive | 2206667 - 2207590 | 33251.4 |
| phosphatidylcholine synthase | F3W81_10430 | Q9KJY8 | Positive | 2207630 - 2208325 | 25659.1 |
| alpha/beta fold hydrolase | F3W81_10435 | Q5I0K5 | Negative | 2208334 - 2209095 | 27472.7 |
| mfs transporter | F3W81_10440 | Not Available | Negative | 2209193 - 2210464 | 44389.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
