Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tol-pal system protein ybgf | F3W81_10345 | Not Available | Negative | 2192234 - 2193100 | 29841.0 |
| peptidoglycan-associated lipoprotein pal | F3W81_10350 | Q98F85 | Negative | 2193125 - 2193658 | 18432.7 |
| tol-pal system protein tolb | F3W81_10355 | Q5LNU4 | Negative | 2193816 - 2195156 | 48019.6 |
| cell envelope biogenesis protein tola | F3W81_10360 | Not Available | Negative | 2195156 - 2196379 | 42427.5 |
| protein tolr | F3W81_10365 | Q9RMT1 | Negative | 2196389 - 2196868 | 16515.1 |
| protein tolq | F3W81_10370 | P50598 | Negative | 2196870 - 2197565 | 25189.4 |
| tol-pal system-associated acyl-coa thioesterase | F3W81_10375 | P44679 | Negative | 2197680 - 2198069 | 14479.5 |
| hypothetical protein | F3W81_10380 | Not Available | Negative | 2198147 - 2198806 | 23492.4 |
| holliday junction branch migration dna helicase ruvb | F3W81_10385 | Q5LNT8 | Negative | 2198879 - 2199916 | 37965.8 |
| holliday junction branch migration protein ruva | F3W81_10390 | Q168A3 | Negative | 2199972 - 2200658 | 23647.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
