Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacid coa-transferase subunit a | F3W81_10295 | B0RVK4 | Positive | 2179415 - 2180113 | 24997.2 |
| 3-oxoacid coa-transferase subunit b | F3W81_10300 | B0RVK3 | Positive | 2180155 - 2180781 | 22061.9 |
| mfs transporter | F3W81_10305 | O32182 | Negative | 2180846 - 2182345 | 52419.7 |
| winged helix dna-binding protein | F3W81_10310 | B0FXI7 | Positive | 2182566 - 2183141 | 20954.4 |
| ligase-associated dna damage response dexh box helicase | F3W81_10315 | Q57742 | Positive | 2183180 - 2185582 | 88636.0 |
| ligase-associated dna damage response endonuclease pdem | F3W81_10320 | Not Available | Positive | 2185575 - 2186252 | 23829.6 |
| formate--tetrahydrofolate ligase | F3W81_10325 | A8LIR1 | Negative | 2186249 - 2187925 | 59993.3 |
| mosc domain-containing protein | F3W81_10330 | O32079 | Negative | 2188234 - 2188857 | 22518.2 |
| atp-dependent zinc metalloprotease ftsh | F3W81_10335 | A1URA3 | Negative | 2188984 - 2190903 | 69077.1 |
| trna lysidine(34) synthetase tils | F3W81_10340 | Q5LNU7 | Negative | 2190984 - 2192237 | 45365.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
