Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine synthase | F3W81_10245 | P29363 | Negative | 2167631 - 2169019 | 50702.6 |
| surf1 family protein | F3W81_10250 | Q9QXU2 | Negative | 2169016 - 2169702 | 24564.6 |
| cytochrome c oxidase subunit 3 | F3W81_10255 | P06030 | Negative | 2169812 - 2170612 | 30175.0 |
| cytochrome c oxidase assembly protein | F3W81_10260 | Q5LNX9 | Negative | 2170637 - 2171224 | 21543.4 |
| cytochrome c oxidase assembly protein | F3W81_10265 | P08302 | Negative | 2171228 - 2171425 | 7081.77 |
| protoheme ix farnesyltransferase | F3W81_10270 | Q1GE49 | Negative | 2171427 - 2172377 | 34224.3 |
| cytochrome c oxidase subunit ii | F3W81_10275 | Q03736 | Negative | 2172475 - 2173320 | 30812.3 |
| metalloprotease tldd | F3W81_10280 | P0AGG9 | Positive | 2173560 - 2174981 | 49881.7 |
| dna-protecting protein dpra | F3W81_10285 | P43862 | Positive | 2175261 - 2176424 | 40786.4 |
| type i dna topoisomerase | F3W81_10290 | Q9X3X7 | Positive | 2176575 - 2179256 | 98660.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
