Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| choline abc transporter substrate-binding protein | F3W81_10145 | Q9L4K3 | Negative | 2145690 - 2146607 | 32967.9 |
| transcriptional regulator beti | F3W81_10150 | B0CKN5 | Positive | 2146715 - 2147308 | 22275.0 |
| choline-sulfatase | F3W81_10155 | O69787 | Positive | 2147331 - 2148818 | 56252.9 |
| betaine-aldehyde dehydrogenase | F3W81_10160 | A4WUY6 | Positive | 2148821 - 2150281 | 51403.2 |
| choline dehydrogenase | F3W81_10165 | Q985M5 | Positive | 2150293 - 2151954 | 60477.4 |
| nudix domain-containing protein | F3W81_10170 | Q93ZY7 | Positive | 2152153 - 2152623 | 17513.3 |
| duf1178 family protein | F3W81_10175 | Not Available | Positive | 2152702 - 2153139 | 15597.4 |
| sdr family nad(p)-dependent oxidoreductase | F3W81_10180 | P21158 | Positive | 2153170 - 2153817 | 21862.1 |
| aspartate kinase | F3W81_10185 | O69077 | Positive | 2153937 - 2155175 | 44559.4 |
| phosphoenolpyruvate--protein phosphotransferase | F3W81_10190 | P37177 | Positive | 2155473 - 2157734 | 82926.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
