Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | F3W81_09995 | P03009 | Negative | 2114786 - 2115301 | 18533.0 |
| helix-turn-helix domain-containing protein | F3W81_10000 | Not Available | Negative | 2115396 - 2116226 | 30886.8 |
| nad-dependent epimerase/dehydratase family protein | F3W81_10005 | Q9Y7K4 | Positive | 2116325 - 2117227 | 31502.7 |
| bcct family transporter | F3W81_10010 | Q87J97 | Negative | 2117378 - 2118925 | 55331.5 |
| hypothetical protein | F3W81_10015 | Not Available | Negative | 2119339 - 2120820 | 53950.4 |
| pyridoxal kinase | F3W81_10020 | Q2L1P5 | Negative | 2121308 - 2122156 | 29754.0 |
| mfs transporter | F3W81_10025 | O32859 | Positive | 2122504 - 2123769 | 45141.4 |
| isochorismatase family protein | F3W81_10030 | Q93Z51 | Negative | 2123944 - 2124564 | 22163.0 |
| marr family transcriptional regulator | F3W81_10035 | P9WLM4 | Negative | 2124558 - 2125022 | 17367.3 |
| hypothetical protein | F3W81_10040 | Not Available | Positive | 2125565 - 2125783 | 7782.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
