Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2312 domain-containing protein | F3W81_09945 | Q6G1Y5 | Positive | 2102061 - 2102366 | 11416.8 |
| dna methyltransferase | F3W81_09950 | P94147 | Positive | 2102366 - 2104159 | 64824.9 |
| is1380 family transposase | F3W81_09955 | Not Available | Positive | 2104267 - 2105619 | 51229.4 |
| hypothetical protein | F3W81_09960 | Not Available | Positive | 2105854 - 2106222 | 13792.6 |
| hypothetical protein | F3W81_09965 | Not Available | Negative | 2106630 - 2108219 | 57950.5 |
| hypothetical protein | F3W81_09970 | Not Available | Negative | 2108293 - 2109312 | 38129.7 |
| hypothetical protein | F3W81_09975 | P37497 | Negative | 2109729 - 2110220 | 18277.8 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | F3W81_09980 | Q3IBW7 | Negative | 2110515 - 2111420 | 34383.4 |
| hypothetical protein | F3W81_09985 | Not Available | Positive | 2111818 - 2113710 | 70536.4 |
| hypothetical protein | F3W81_09990 | Not Available | Positive | 2113735 - 2114610 | 31811.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
