Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonase/enoyl-coa hydratase family protein | F3W81_09795 | P64019 | Negative | 2076608 - 2077429 | 28692.8 |
| pyridoxal phosphate-dependent aminotransferase | F3W81_09800 | A7HCR6 | Positive | 2077612 - 2078736 | 39312.9 |
| aminotransferase class v-fold plp-dependent enzyme | F3W81_09805 | A1B8Z3 | Negative | 2078796 - 2079992 | 42483.1 |
| protein tyrosine phosphatase | F3W81_09810 | Not Available | Positive | 2080416 - 2081099 | 26023.2 |
| atp-binding cassette domain-containing protein | F3W81_09815 | Q2LVL0 | Positive | 2081096 - 2082964 | 66456.6 |
| glycosyltransferase | F3W81_09820 | P0A5A0 | Negative | 2082961 - 2083491 | 18514.2 |
| folate-binding protein | F3W81_09825 | Q4P7A4 | Positive | 2083575 - 2084354 | 27852.1 |
| elongation factor p | F3W81_09830 | Q1GF47 | Negative | 2084810 - 2085373 | 21044.2 |
| elongation factor p | F3W81_09835 | Not Available | Positive | 2085585 - 2085905 | 11608.5 |
| cobyric acid synthase | F3W81_09840 | Q1GF45 | Positive | 2086023 - 2087486 | 51637.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
