Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydropteroate synthase | F3W81_09545 | P0AC14 | Negative | 2021961 - 2022980 | 36334.7 |
| diguanylate cyclase | F3W81_09550 | Q9X8I0 | Negative | 2023061 - 2024005 | 34011.7 |
| cell wall hydrolase | F3W81_09555 | Q9KCE0 | Negative | 2024325 - 2024957 | 23144.9 |
| pyruvate, phosphate dikinase | F3W81_09560 | Q59754 | Negative | 2025115 - 2027679 | 92880.6 |
| glycine--trna ligase subunit beta | F3W81_09565 | Q1GE74 | Negative | 2027801 - 2030065 | 82587.6 |
| duf1206 domain-containing protein | F3W81_09570 | P39139 | Negative | 2030231 - 2031151 | 32202.3 |
| histidine kinase | F3W81_09575 | Not Available | Negative | 2031304 - 2031837 | 19184.6 |
| glycine--trna ligase subunit alpha | F3W81_09580 | A1AZF6 | Negative | 2031919 - 2032878 | 35815.4 |
| peptidoglycan-binding protein | F3W81_09585 | P55377 | Positive | 2033079 - 2034860 | 62543.7 |
| cyanase | F3W81_09590 | A6W1Q1 | Negative | 2034939 - 2035379 | 15914.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
