Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gatb/yqey domain-containing protein | F3W81_09495 | P54464 | Negative | 2011451 - 2011912 | 17050.6 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | F3W81_09500 | Q5LTN6 | Positive | 2012279 - 2013445 | 41565.3 |
| glycosyltransferase | F3W81_09505 | P96587 | Positive | 2013626 - 2015539 | 71902.6 |
| fcd domain-containing protein | F3W81_09510 | O05494 | Negative | 2015536 - 2016186 | 24130.8 |
| pyrimidine 5'-nucleotidase | F3W81_09515 | Q09893 | Positive | 2016301 - 2016945 | 23941.5 |
| ubih/ubif family hydroxylase | F3W81_09520 | Q2RMZ4 | Positive | 2017012 - 2018208 | 42955.0 |
| asnc family transcriptional regulator | F3W81_09525 | Q44333 | Negative | 2018277 - 2018735 | 16945.7 |
| winged helix-turn-helix transcriptional regulator | F3W81_09530 | P0ACJ7 | Negative | 2018732 - 2019187 | 17399.0 |
| ketol-acid reductoisomerase | F3W81_09535 | A8LS39 | Positive | 2019315 - 2020337 | 37122.7 |
| hsp70 family protein | F3W81_09540 | P36928 | Positive | 2020709 - 2021956 | 43951.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
