Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | F3W81_09395 | Not Available | Positive | 1992103 - 1992717 | 20835.8 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | F3W81_09400 | P43874 | Positive | 1992981 - 1993475 | 17316.8 |
| acetyl-coa carboxylase biotin carboxylase subunit | F3W81_09405 | P24182 | Positive | 1993484 - 1994833 | 48945.6 |
| leucyl/phenylalanyl-trna--protein transferase | F3W81_09410 | A4WSI3 | Positive | 1994975 - 1995643 | 24813.3 |
| duf2155 domain-containing protein | F3W81_09415 | Q9ZDG9 | Negative | 1995650 - 1996117 | 16275.0 |
| outer membrane lipid asymmetry maintenance protein mlad | F3W81_09420 | P45029 | Negative | 1996120 - 1996578 | 15373.1 |
| nadh:ubiquinone oxidoreductase subunit ndufa12 | F3W81_09425 | Q0MQ86 | Negative | 1996714 - 1997097 | 14526.0 |
| atp-dependent clp protease atp-binding subunit clpx | F3W81_09430 | Q165G0 | Negative | 1997349 - 1998614 | 45830.1 |
| atp-dependent clp protease proteolytic subunit | F3W81_09435 | A8LJA8 | Negative | 1998776 - 1999408 | 23233.1 |
| duf1045 domain-containing protein | F3W81_09440 | A6SU94 | Positive | 1999729 - 2000415 | 24505.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
