Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium:solute symporter | F3W81_09345 | P23545 | Negative | 1979483 - 1982170 | 95798.1 |
| hypothetical protein | F3W81_09350 | Not Available | Negative | 1982272 - 1982499 | 8342.64 |
| response regulator | F3W81_09355 | O69730 | Negative | 1982496 - 1982864 | 13232.0 |
| helix-turn-helix domain-containing protein | F3W81_09360 | P9WMI0 | Negative | 1982988 - 1984322 | 47995.9 |
| abc transporter substrate-binding protein | F3W81_09365 | Q2YK58 | Positive | 1984539 - 1985882 | 46930.2 |
| branched-chain amino acid abc transporter permease | F3W81_09370 | P0A2J2 | Positive | 1986032 - 1987063 | 37034.7 |
| branched-chain amino acid abc transporter permease | F3W81_09375 | P21628 | Positive | 1987067 - 1988269 | 43140.4 |
| atp-binding cassette domain-containing protein | F3W81_09380 | P21629 | Positive | 1988279 - 1989040 | 27700.8 |
| atp-binding cassette domain-containing protein | F3W81_09385 | P22731 | Positive | 1989055 - 1989810 | 27684.3 |
| acetate--coa ligase | F3W81_09390 | O68040 | Positive | 1989942 - 1991894 | 71799.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
