Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 1972465 - 1972540 | Not Available |
| abc transporter permease subunit | F3W81_09300 | P71338 | Negative | 1972609 - 1974279 | 59763.4 |
| duf2312 domain-containing protein | F3W81_09305 | Q6G1Y5 | Negative | 1974466 - 1974729 | 10049.9 |
| hypothetical protein | F3W81_09310 | Not Available | Positive | 1974894 - 1975109 | 7501.57 |
| hypothetical protein | F3W81_09315 | Not Available | Negative | 1975366 - 1975590 | 8327.97 |
| mbl fold metallo-hydrolase | F3W81_09320 | Q3JRV4 | Positive | 1975834 - 1976697 | 31200.0 |
| yeee/yede family protein | F3W81_09325 | Q87AD4 | Positive | 1976714 - 1977139 | 14527.2 |
| hypothetical protein | F3W81_09330 | Q87AD3 | Positive | 1977139 - 1977570 | 15051.7 |
| tigr01244 family phosphatase | F3W81_09335 | Q8UAA9 | Positive | 1977581 - 1978006 | 14828.5 |
| flagellar motor switch protein flim | F3W81_09340 | Not Available | Negative | 1978193 - 1979416 | 42939.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
