Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family nad(p)-dependent oxidoreductase | F3W81_09195 | Q6GDV6 | Negative | 1952841 - 1953515 | 23672.9 |
| 30s ribosomal protein s21 | F3W81_09200 | Q28KF4 | Negative | 1953841 - 1954044 | 7915.75 |
| branched-chain amino acid transporter | F3W81_09205 | Not Available | Negative | 1954934 - 1955230 | 10000.7 |
| branched-chain amino acid abc transporter permease | F3W81_09210 | Q9ZJQ3 | Negative | 1955227 - 1955907 | 23403.9 |
| asnc family transcriptional regulator | F3W81_09215 | P55658 | Positive | 1956011 - 1956463 | 16840.3 |
| hypothetical protein | F3W81_09220 | P24577 | Positive | 1956562 - 1957755 | 44569.4 |
| hypothetical protein | F3W81_09225 | Not Available | Negative | 1958005 - 1958472 | 17896.6 |
| atp-binding cassette domain-containing protein | F3W81_09230 | Q8VQK7 | Negative | 1958733 - 1959689 | 34241.6 |
| abc transporter permease subunit | F3W81_09235 | Q53193 | Negative | 1959686 - 1961575 | 66451.0 |
| abc transporter permease subunit | F3W81_09240 | A0A0H2ZGW7 | Negative | 1961572 - 1962519 | 33639.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
