Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | F3W81_09095 | Q9ABX9 | Positive | 1927033 - 1929099 | 74035.7 |
| lysr family transcriptional regulator | F3W81_09100 | Q8YQ82 | Negative | 1928997 - 1929518 | 18377.3 |
| hypothetical protein | F3W81_09105 | Not Available | Positive | 1929533 - 1929940 | 13590.2 |
| hypothetical protein | F3W81_09110 | Q0SFL6 | Positive | 1930004 - 1930708 | 25087.3 |
| atp-binding cassette domain-containing protein | F3W81_09115 | Q57180 | Positive | 1930861 - 1932708 | 67904.0 |
| helix-turn-helix domain-containing protein | F3W81_09120 | Q51872 | Negative | 1932745 - 1933608 | 31005.2 |
| eama family transporter | F3W81_09125 | P42194 | Positive | 1933695 - 1934558 | 30617.4 |
| methyltransferase | F3W81_09130 | P9WLW8 | Negative | 1934555 - 1935202 | 24561.8 |
| methyltransferase domain-containing protein | F3W81_09135 | B0RVK2 | Negative | 1935445 - 1938702 | 122509.0 |
| n-methyl-l-proline n-demethylase hpba | F3W81_09140 | O87278 | Negative | 1938943 - 1940979 | 74646.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
