Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | F3W81_09045 | P25524 | Negative | 1915970 - 1917211 | 44417.8 |
| m24 family metallopeptidase | F3W81_09050 | P65811 | Positive | 1917394 - 1918563 | 41432.0 |
| asp/glu racemase | F3W81_09055 | Q05115 | Positive | 1918560 - 1919354 | 28392.1 |
| hypothetical protein | F3W81_09060 | Not Available | Positive | 1919463 - 1919759 | 10869.2 |
| laci family dna-binding transcriptional regulator | F3W81_09065 | P0ACN9 | Negative | 1919838 - 1920848 | 35460.5 |
| tim barrel protein | F3W81_09070 | A4IPB5 | Positive | 1921014 - 1922072 | 38771.5 |
| gfo/idh/moca family oxidoreductase | F3W81_09075 | P55480 | Positive | 1922069 - 1923226 | 41318.2 |
| hypothetical protein | F3W81_09080 | Q1AXG5 | Positive | 1923211 - 1924724 | 54758.8 |
| abc transporter permease | F3W81_09085 | P44736 | Positive | 1924721 - 1925722 | 34589.5 |
| substrate-binding domain-containing protein | F3W81_09090 | P02925 | Positive | 1925746 - 1926699 | 33990.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
