Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase subunit alpha | F3W81_08945 | O34720 | Negative | 1891384 - 1894257 | 103966.0 |
| formate dehydrogenase | F3W81_08950 | Q46507 | Negative | 1894385 - 1895902 | 52824.6 |
| formate dehydrogenase subunit gamma | F3W81_08955 | Q9I0J8 | Negative | 1895899 - 1896366 | 16441.9 |
| lysr family transcriptional regulator | F3W81_08960 | P23841 | Negative | 1896459 - 1897343 | 31761.7 |
| hemin uptake protein hemp | F3W81_08965 | Not Available | Negative | 1897528 - 1897689 | 5738.99 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | F3W81_08970 | P16689 | Positive | 1898069 - 1899310 | 44972.1 |
| extracellular solute-binding protein | F3W81_08975 | P44731 | Positive | 1899649 - 1900770 | 40548.6 |
| atp-binding cassette domain-containing protein | F3W81_08980 | Q47T99 | Positive | 1900941 - 1902041 | 38990.1 |
| abc transporter permease subunit | F3W81_08985 | P31135 | Positive | 1902038 - 1903411 | 50305.5 |
| abc transporter permease subunit | F3W81_08990 | P0AFL2 | Positive | 1903521 - 1904354 | 29908.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
