Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydantoinase/carbamoylase family amidase | F3W81_08795 | Q6DTN4 | Negative | 1858341 - 1859591 | 44650.0 |
| tetr family transcriptional regulator | F3W81_08800 | Q8X4Z7 | Positive | 1859839 - 1860483 | 24021.9 |
| yigz family protein | F3W81_08805 | Q9XWF4 | Negative | 1860660 - 1861031 | 13254.0 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | F3W81_08810 | P25889 | Negative | 1861173 - 1862477 | 47190.4 |
| nad(p)-binding protein | F3W81_08815 | P76440 | Negative | 1862544 - 1863878 | 46591.9 |
| h-ns histone family protein | F3W81_08820 | P42505 | Negative | 1864146 - 1864475 | 12282.6 |
| anthranilate synthase | F3W81_08825 | P15395 | Negative | 1864731 - 1866914 | 80242.5 |
| amino acid synthesis family protein | F3W81_08830 | Not Available | Negative | 1867264 - 1867842 | 20070.4 |
| upf0280 family protein | F3W81_08835 | Q8TYT6 | Negative | 1867835 - 1868689 | 28943.8 |
| 6-hydroxynicotinate reductase | F3W81_08840 | Q0QLF7 | Negative | 1868704 - 1870131 | 49968.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
