Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polyhydroxyalkanoate depolymerase | F3W81_08745 | Not Available | Negative | 1847445 - 1848716 | 46863.0 |
| class i poly(r)-hydroxyalkanoic acid synthase | F3W81_08750 | O66392 | Positive | 1848850 - 1850658 | 67146.6 |
| phasin, phap | F3W81_08755 | Not Available | Positive | 1850804 - 1851253 | 15760.7 |
| polyhydroxyalkanoate synthesis repressor phar | F3W81_08760 | P45373 | Positive | 1851518 - 1852084 | 20749.8 |
| lysr family transcriptional regulator | F3W81_08765 | Q9HWH8 | Positive | 1852092 - 1853066 | 35165.5 |
| abc transporter substrate-binding protein | F3W81_08770 | Q9K9G5 | Negative | 1853133 - 1854137 | 35827.3 |
| abc transporter permease subunit | F3W81_08775 | Q9K9G6 | Negative | 1854165 - 1855010 | 30488.9 |
| abc transporter permease subunit | F3W81_08780 | Q57306 | Negative | 1855007 - 1855921 | 32602.8 |
| atp-binding cassette domain-containing protein | F3W81_08785 | Q57855 | Negative | 1855952 - 1856719 | 28294.2 |
| dihydropyrimidinase | F3W81_08790 | Q9I676 | Negative | 1856745 - 1858205 | 53478.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
