Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | F3W81_08695 | Q9Z3S3 | Positive | 1835413 - 1836717 | 46390.7 |
| gnat family n-acetyltransferase | F3W81_08700 | O17731 | Negative | 1836764 - 1837252 | 17254.7 |
| aminotransferase | F3W81_08705 | P39623 | Positive | 1837448 - 1838665 | 44507.3 |
| trna pseudouridine(38-40) synthase trua | F3W81_08710 | Q5LNR0 | Negative | 1838812 - 1839594 | 29095.8 |
| ycjx family protein | F3W81_08715 | P76046 | Positive | 1839661 - 1841136 | 54294.3 |
| gnat family n-acetyltransferase | F3W81_08720 | Not Available | Positive | 1841133 - 1841630 | 18362.9 |
| tigr01620 family protein | F3W81_08725 | Q98M18 | Positive | 1841627 - 1842673 | 37296.6 |
| isoleucine--trna ligase | F3W81_08730 | Q5LNR7 | Positive | 1843125 - 1846052 | 109893.0 |
| hypothetical protein | F3W81_08735 | Not Available | Negative | 1846137 - 1846586 | 15407.2 |
| methylated-dna--[protein]-cysteine s-methyltransferase | F3W81_08740 | P11742 | Positive | 1846904 - 1847371 | 16759.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
