Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hotdog fold thioesterase | F3W81_08595 | Not Available | Positive | 1810641 - 1811087 | 15252.5 |
| duf2235 domain-containing protein | F3W81_08600 | P39992 | Negative | 1811103 - 1812164 | 39607.7 |
| molybdopterin-dependent oxidoreductase | F3W81_08605 | P19913 | Negative | 1812145 - 1814454 | 82647.7 |
| valine--trna ligase | F3W81_08610 | Q5LP30 | Positive | 1814742 - 1817669 | 108985.0 |
| duf2842 domain-containing protein | F3W81_08615 | Not Available | Negative | 1817794 - 1818015 | 8213.57 |
| adenylosuccinate synthase | F3W81_08620 | Q168S1 | Negative | 1818156 - 1819451 | 46795.1 |
| preprotein translocase subunit secg | F3W81_08625 | Q9HV52 | Positive | 1819782 - 1820159 | 11982.5 |
| ctp synthase | F3W81_08630 | Q168S7 | Positive | 1820441 - 1822084 | 60914.8 |
| pas domain-containing protein | F3W81_08635 | Q1M667 | Positive | 1822981 - 1823991 | 37260.7 |
| mfs transporter | F3W81_08640 | P37643 | Negative | 1824192 - 1825490 | 46103.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
