Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | F3W81_08545 | P52087 | Positive | 1799248 - 1801731 | 89663.5 |
| hypothetical protein | F3W81_08550 | Not Available | Positive | 1801817 - 1802098 | 10295.4 |
| amidohydrolase family protein | F3W81_08555 | A4XJI3 | Negative | 1802603 - 1804108 | 54095.3 |
| transcriptional regulator | F3W81_08560 | O27346 | Positive | 1804200 - 1804556 | 13569.5 |
| cryptochrome/photolyase family protein | F3W81_08565 | A9CH39 | Negative | 1805099 - 1806442 | 51562.4 |
| Trna-leu | Not Available | Not Available | Positive | 1806674 - 1806757 | Not Available |
| rhomboid family intramembrane serine protease | F3W81_08575 | P54493 | Positive | 1806920 - 1807666 | 27125.4 |
| inositol monophosphatase | F3W81_08580 | Q92M71 | Negative | 1807786 - 1808574 | 28832.7 |
| lysr family transcriptional regulator | F3W81_08585 | P0A9G0 | Negative | 1808640 - 1809614 | 35947.7 |
| methylenetetrahydrofolate reductase | F3W81_08590 | P71319 | Positive | 1809708 - 1810574 | 31236.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
