Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | F3W81_08445 | Q9KQH7 | Negative | 1779478 - 1780257 | 26379.9 |
| nuclear transport factor 2 family protein | F3W81_08450 | Not Available | Negative | 1780257 - 1780577 | 11402.5 |
| lysr family transcriptional regulator | F3W81_08455 | P75836 | Positive | 1780679 - 1781596 | 32950.9 |
| gnat family n-acetyltransferase | F3W81_08460 | Not Available | Positive | 1781874 - 1782344 | 17382.0 |
| deor family transcriptional regulator | F3W81_08465 | Q51391 | Negative | 1782766 - 1783539 | 28173.6 |
| autotransporter domain-containing protein | F3W81_08470 | P09489 | Negative | 1783659 - 1786847 | 112175.0 |
| lysr family transcriptional regulator | F3W81_08475 | P0DUU5 | Negative | 1787065 - 1787961 | 31933.5 |
| fmn-dependent nadh-azoreductase | F3W81_08480 | Q28QS5 | Positive | 1788090 - 1788704 | 21691.2 |
| hypothetical protein | F3W81_08485 | Not Available | Positive | 1788867 - 1788983 | 4563.53 |
| hypothetical protein | F3W81_08490 | Not Available | Negative | 1789612 - 1789906 | 10444.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
