Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Pseudooceanicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Pseudooceanicola |
| Species | Pseudooceanicola spongiae |
| Strain | HQ09 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
799114 bp
Thymine Count
802892 bp
Guanine Count
1386602 bp
Cytosine Count
1377173 bp
Genome Length
4365781 bp
Protein-coding Genes
4001 genes
Non-Coding Genes
122 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease subunit | F3W81_08295 | P0AFK4 | Positive | 1746668 - 1747582 | 33813.3 |
| abc transporter permease subunit | F3W81_08300 | P0AFL2 | Positive | 1747575 - 1748378 | 29050.1 |
| extracellular solute-binding protein | F3W81_08305 | P44731 | Positive | 1748418 - 1749437 | 37253.0 |
| amidohydrolase family protein | F3W81_08310 | A0A1I9LN01 | Positive | 1749517 - 1751184 | 60221.6 |
| hypothetical protein | F3W81_08315 | D4GYE7 | Positive | 1751581 - 1752182 | 21638.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | F3W81_08320 | Q2YKV1 | Negative | 1752215 - 1752688 | 16878.9 |
| hypothetical protein | F3W81_08325 | Q9HU16 | Positive | 1752761 - 1753021 | 9205.98 |
| hypothetical protein | F3W81_08330 | Q1QUN2 | Positive | 1753055 - 1754026 | 34845.1 |
| trap transporter small permease subunit | F3W81_08335 | Not Available | Positive | 1754087 - 1754644 | 19889.7 |
| amidohydrolase | F3W81_08340 | Q8H3C9 | Positive | 1754625 - 1755812 | 42138.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
